Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793128.1_cds_XP_016516144.1_2771
CDS Infomation

[gene=LOC107832778] [db_xref=GeneID:107832778] [protein=allene oxide synthase, chloroplastic-like] [protein_id=XP_016516144.1] [location=complement(133329..134906)] [gbkey=CDS]
Sequence

ATGGCAGTAGCAACAGCAACAGCAACATTATCTTCGTCTTCTGTTTTTCCTCTCCATTCT
CTTCACCAACAGTTTCCATCAAAATACTTCACTGTTCGTCCCATTACAGTCTCTTTATCC
GAAAAAATACCAGCAGTGACACAATCGTCTGAGCTCACAAAATTACCGATCCGTAAAATT
CCCGGCGATTATGGTCTTCCTTTAATTGGTCCATGGAAAGATAGACAAGATTATTTTTAC
AATCAAGGTAAAGAAGAATTCTTCAGATCAAGAATTCAAAAATACAAATCTACTGTATTT
AAAACCAATATGCCACCTGGAAATTTCATTTCTTCCAATCCAAACGTTGTCGTTTTGCTC
GACGGCAAGAGTTTTCCGACCCTCTTCGACATTTCTAAAGTCGAGAAAAAGGATCTCTTC
ACCGGAACTTTCATGCCGTCGACTGAACTCACCGGCGGTTATCGTGTTCTTTCTTATCTC
GATCCTTCTGAACCGAACCATGAAAAATTAAAAAAGCTCCTCTTTTTTCTTCTTACTTCT
CGTCGTGATTACATAATACCCCAGTTTCACGAAAGCTATACGGAGCTGTTTAAAACCCTA
GAAAAGGAAATGGAGAAAAATGGTAAAGCTGATTTAAACTCAGCTAATGATCAAGCCGCG
TTTAATTTCTTGGCTAAATCATTGTACGGAGCGAACCCAGTTGAGACTAAGCTCGGAACT
GATGGTCCCACATTGATCGGAAAATGGGTGTTGTTTCAGCTTCATCCTTTGCTCACTCTT
GGTCTTCCGAAGGTTCTAGACGACTTTCTCCTCCATAATTTCCGGTTACCGCCAGCTCTA
GTGAAGAAAGATTACCAGAGACTCTACGATTTCTTCTATGAGAGCTCCACTACTGTGCTA
AACGAAGCTGAAAATTTTGGTATTTCGCGCGACGAAGCTTGTCATAACCTTCTCTTCGCT
ACGTGTTTCAATTCCTTTGGCGGGATGAAGATTTTCTTTCCTAATATGCTGAAATGGATA
GCTAGAGCAGGAGTAGAGCTCCATATCCGGTTAGCGAACGAGATCCGATCCGCCGTAAAA
TCCGCCGGCGGGAAGATCACGATGTCGGCGATGGAGAAAATGCCTGTGATGAAATCGGTT
GTATACGAGGCTTTACGAATTGATCCACCAGTTGCTTCGCAATACGGGAGAGCCAAACGT
GACCTTATGATCGAATCACACGACGCCGTTTTTGAGGTGAAGAAAGGTGAATTGTTATTC
GGGTACCAACCGTTTGCGACGAAGGATCCGAAGAGTTTTGACCGACCCGATGAGTTCGTA
CCCGATCGGTTCGTAGGTGAAGAAGGGGAAAAGCTATTGAAACATGTATTATGGTCTAAC
GGACCTGAAACGGAGAGTCCGACGGTGGAGAATAAACAATGTGCTGGAAAGGATTTTGTG
GTGCTGGTTTCGAGATTGTTAGTAACGGAGTTTTTTCTCCGTTATGACACGTTGGATATC
GACGTCGGCACGTCGCCGTTAGGAGCTAAGATTACTATAACTTCTTTGAAGATGATCGGA
GTTGGAACGGAAATTTGA

Peptide Sequence

PEP ID

XP_016516144.1
PEP Infomation

PREDICTED: allene oxide synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVATATATLSSSSVFPLHSLHQQFPSKYFTVRPITVSLSEKIPAVTQSSELTKLPIRKI
PGDYGLPLIGPWKDRQDYFYNQGKEEFFRSRIQKYKSTVFKTNMPPGNFISSNPNVVVLL
DGKSFPTLFDISKVEKKDLFTGTFMPSTELTGGYRVLSYLDPSEPNHEKLKKLLFFLLTS
RRDYIIPQFHESYTELFKTLEKEMEKNGKADLNSANDQAAFNFLAKSLYGANPVETKLGT
DGPTLIGKWVLFQLHPLLTLGLPKVLDDFLLHNFRLPPALVKKDYQRLYDFFYESSTTVL
NEAENFGISRDEACHNLLFATCFNSFGGMKIFFPNMLKWIARAGVELHIRLANEIRSAVK
SAGGKITMSAMEKMPVMKSVVYEALRIDPPVASQYGRAKRDLMIESHDAVFEVKKGELLF
GYQPFATKDPKSFDRPDEFVPDRFVGEEGEKLLKHVLWSNGPETESPTVENKQCAGKDFV
VLVSRLLVTEFFLRYDTLDIDVGTSPLGAKITITSLKMIGVGTEI

Transcript Sequence

Gene sequence data has not been registered.